Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cldn9Q9Z0S7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cldn9Q9Z0S7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cldn9Q9Z0S7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms