Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.76□□□□□ -0.53
ClcnkaQ9WUB7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm2231-201ENSMUST00000125661 612 ntBASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm10146-201ENSMUST00000072739 309 ntBASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
ClcnkaQ9WUB7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm16479-201ENSMUST00000121706 932 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm26185-201ENSMUST00000157692 266 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm17150-201ENSMUST00000165577 381 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gm4271-201ENSMUST00000174444 973 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
ClcnkaQ9WUB7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms