Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AmfrQ9R049 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.25□□□□□ -0.13
AmfrQ9R049 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AmfrQ9R049 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm16202-201ENSMUST00000117532 544 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm7029-201ENSMUST00000173226 450 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Snora73a-201ENSMUST00000082453 205 ntBASIC14.24□□□□□ -0.13
AmfrQ9R049 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.24□□□□□ -0.13
AmfrQ9R049 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AmfrQ9R049 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Gm11637-201ENSMUST00000120601 592 ntBASIC14.23□□□□□ -0.13
AmfrQ9R049 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AmfrQ9R049 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AmfrQ9R049 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm8805-201ENSMUST00000117848 313 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm1335-201ENSMUST00000121653 386 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm2231-201ENSMUST00000125661 612 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.22□□□□□ -0.13
AmfrQ9R049 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm43438-201ENSMUST00000198133 379 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.22□□□□□ -0.13
AmfrQ9R049 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms