Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm26989-201ENSMUST00000182608 749 ntBASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm19587-201ENSMUST00000191395 545 ntBASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm37981-201ENSMUST00000194280 535 ntBASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col4a4Q9QZR9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm17192-201ENSMUST00000169031 511 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm18776-201ENSMUST00000188833 654 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm5870-201ENSMUST00000196461 282 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm42816-201ENSMUST00000198433 325 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm44647-201ENSMUST00000207402 428 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.4□□□□□ -0.42
Col4a4Q9QZR9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.4□□□□□ -0.43
Col4a4Q9QZR9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a4Q9QZR9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col4a4Q9QZR9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm14942-201ENSMUST00000119642 336 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm14247-201ENSMUST00000120950 237 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm18711-201ENSMUST00000199341 750 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm18561-201ENSMUST00000206027 804 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.39□□□□□ -0.43
Col4a4Q9QZR9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col4a4Q9QZR9 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms