Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nr2e3Q9QXZ7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm5904-201ENSMUST00000210286 865 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nr2e3Q9QXZ7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nr2e3Q9QXZ7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nr2e3Q9QXZ7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms