Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm37447-201ENSMUST00000195625 2928 ntBASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trem1Q9JKE2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm9727-201ENSMUST00000161387 555 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm27631-201ENSMUST00000184163 466 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Mir125a-201ENSMUST00000083545 68 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trem1Q9JKE2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Gm6443-201ENSMUST00000203599 874 ntBASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Gm18057-201ENSMUST00000208220 503 ntBASIC11.35□□□□□ -0.59
Trem1Q9JKE2 Gm45453-201ENSMUST00000211758 853 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms