Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Gm13350-201ENSMUST00000120519 479 ntBASIC16.72■□□□□ 0.27
U2af1Q9D883 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.72■□□□□ 0.27
U2af1Q9D883 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.72■□□□□ 0.27
U2af1Q9D883 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
U2af1Q9D883 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
U2af1Q9D883 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.72■□□□□ 0.27
U2af1Q9D883 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
U2af1Q9D883 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Gm37737-201ENSMUST00000195013 1638 ntBASIC16.71■□□□□ 0.27
U2af1Q9D883 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
U2af1Q9D883 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Gm8018-201ENSMUST00000173536 789 ntBASIC16.71■□□□□ 0.27
U2af1Q9D883 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
U2af1Q9D883 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 CT025533.2-201ENSMUST00000228715 1248 ntBASIC16.71■□□□□ 0.27
U2af1Q9D883 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
U2af1Q9D883 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
U2af1Q9D883 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
U2af1Q9D883 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
U2af1Q9D883 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
U2af1Q9D883 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
U2af1Q9D883 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm11531-201ENSMUST00000117614 555 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm5950-201ENSMUST00000213337 772 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
U2af1Q9D883 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
U2af1Q9D883 Gm42840-201ENSMUST00000200303 2251 ntBASIC16.7■□□□□ 0.26
U2af1Q9D883 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
U2af1Q9D883 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
U2af1Q9D883 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.69■□□□□ 0.26
U2af1Q9D883 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.69■□□□□ 0.26
U2af1Q9D883 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
U2af1Q9D883 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
U2af1Q9D883 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.69■□□□□ 0.26
U2af1Q9D883 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms