Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm27701-201ENSMUST00000184498 110 ntBASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp4cQ9D7F7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp4cQ9D7F7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm11918-201ENSMUST00000121660 179 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Proscos-202ENSMUST00000178990 666 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Gm18473-201ENSMUST00000220543 868 ntBASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp4cQ9D7F7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Gm42706-201ENSMUST00000199733 1910 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Gm13369-201ENSMUST00000119442 987 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp4cQ9D7F7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms