Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rita1Q9D1H0 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm13315-201ENSMUST00000120376 991 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm44364-201ENSMUST00000198368 141 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm30285-201ENSMUST00000214614 422 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Rita1Q9D1H0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm22323-201ENSMUST00000103832 109 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm24255-201ENSMUST00000104481 128 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm15703-201ENSMUST00000120250 880 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm25043-201ENSMUST00000158604 212 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gm39404-201ENSMUST00000216350 313 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rita1Q9D1H0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms