Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm7561-201ENSMUST00000211203 886 ntBASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm29705-201ENSMUST00000212598 474 ntBASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Khdc3Q9CWU5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gm29649-201ENSMUST00000185649 419 ntBASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Khdc3Q9CWU5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Khdc3Q9CWU5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms