Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm12795-201ENSMUST00000117594 539 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cldnd1Q9CQX5 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm11989-201ENSMUST00000117240 672 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm11362-201ENSMUST00000118838 850 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm12196-201ENSMUST00000120954 262 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm11675-201ENSMUST00000121873 832 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm38210-201ENSMUST00000191944 809 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Ginm1-202ENSMUST00000065124 300 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Gm9996-201ENSMUST00000070359 913 ntBASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cldnd1Q9CQX5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Cldnd1Q9CQX5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cldnd1Q9CQX5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cldnd1Q9CQX5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms