Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chchd1Q9CQA6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Chchd1Q9CQA6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm6222-201ENSMUST00000120787 396 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm8927-201ENSMUST00000181978 981 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm5177-201ENSMUST00000183092 997 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Gm3222-201ENSMUST00000071282 990 ntBASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chchd1Q9CQA6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chchd1Q9CQA6 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms