Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Matn2-203ENSMUST00000226766 3252 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.47□□□□□ -0.41
Trim16Q99PP9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim16Q99PP9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.46□□□□□ -0.41
Trim16Q99PP9 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.46□□□□□ -0.41
Trim16Q99PP9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.46□□□□□ -0.41
Trim16Q99PP9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim16Q99PP9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim16Q99PP9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.46□□□□□ -0.42
Trim16Q99PP9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.45□□□□□ -0.42
Trim16Q99PP9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim16Q99PP9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms