Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim33Q99PP7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 Gm16479-201ENSMUST00000121706 932 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.69□□□□□ -0.38
Trim33Q99PP7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trim33Q99PP7 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm15824-201ENSMUST00000119516 955 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm45574-201ENSMUST00000210921 331 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.68□□□□□ -0.38
Trim33Q99PP7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim33Q99PP7 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.67□□□□□ -0.38
Trim33Q99PP7 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim33Q99PP7 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 404.3 ms