Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col25a1Q99MQ5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gm13035-201ENSMUST00000117496 342 ntBASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gm29741-201ENSMUST00000192667 421 ntBASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col25a1Q99MQ5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Gm13549-201ENSMUST00000118339 796 ntBASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Gm35960-201ENSMUST00000202712 767 ntBASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Gm14005-208ENSMUST00000223654 681 ntBASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col25a1Q99MQ5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col25a1Q99MQ5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms