Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lysmd3Q99LE3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm13350-201ENSMUST00000120519 479 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm7584-201ENSMUST00000175829 940 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lysmd3Q99LE3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lysmd3Q99LE3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lysmd3Q99LE3 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms