Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Mir1247-201ENSMUST00000116706 82 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Gm43133-201ENSMUST00000197472 463 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Gm22058-201ENSMUST00000083393 310 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdha9Q91Y11 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm17420-201ENSMUST00000164753 153 ntBASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm8018-201ENSMUST00000173536 789 ntBASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm45880-201ENSMUST00000213041 853 ntBASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdha9Q91Y11 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdha9Q91Y11 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms