Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gm24526-201ENSMUST00000082921 158 ntBASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb1Q91Y08 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb1Q91Y08 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Gm40466-201ENSMUST00000212174 422 ntBASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhb1Q91Y08 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhb1Q91Y08 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms