Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhga11Q91XY8 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gm5035-201ENSMUST00000215581 927 ntBASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhga11Q91XY8 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga11Q91XY8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga11Q91XY8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga11Q91XY8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga11Q91XY8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pcdhga11Q91XY8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm4984-201ENSMUST00000115987 360 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm27892-201ENSMUST00000185017 106 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm28693-202ENSMUST00000190758 331 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm17794-201ENSMUST00000220252 955 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm25857-201ENSMUST00000082788 129 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms