Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Pcdhga3Q91XY5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gm8213-201ENSMUST00000118191 441 ntBASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gm11978-201ENSMUST00000122315 466 ntBASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Pcdhga3Q91XY5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm11478-201ENSMUST00000117851 599 ntBASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm6458-201ENSMUST00000211573 635 ntBASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdhga3Q91XY5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms