Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhga6Q91XY2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm27023-201ENSMUST00000182372 285 ntBASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhga6Q91XY2 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gm9083-201ENSMUST00000120423 819 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gm8738-201ENSMUST00000172606 329 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhga6Q91XY2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga6Q91XY2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhga6Q91XY2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms