Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm24749-201ENSMUST00000157838 343 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm25043-201ENSMUST00000158604 212 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm5904-201ENSMUST00000210286 865 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Spcs1-203ENSMUST00000226374 592 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.6□□□□□ -0.39
Vsx1Q91V10 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm44651-201ENSMUST00000207343 372 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm22058-201ENSMUST00000083393 310 ntBASIC12.59□□□□□ -0.39
Vsx1Q91V10 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx1Q91V10 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx1Q91V10 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
Vsx1Q91V10 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx1Q91V10 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.58□□□□□ -0.39
Vsx1Q91V10 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx1Q91V10 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Vsx1Q91V10 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.58□□□□□ -0.4
Vsx1Q91V10 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.58□□□□□ -0.4
Vsx1Q91V10 Gm45433-201ENSMUST00000209386 247 ntBASIC12.58□□□□□ -0.4
Vsx1Q91V10 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vsx1Q91V10 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.58□□□□□ -0.4
Vsx1Q91V10 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vsx1Q91V10 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms