Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm13369-201ENSMUST00000119442 987 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm12291-201ENSMUST00000121627 311 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm26185-201ENSMUST00000157692 266 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Gm9002-201ENSMUST00000178437 499 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.67□□□□□ -0.7
H1fooQ8VIK3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm12203-201ENSMUST00000118235 598 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm12209-201ENSMUST00000120089 596 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm16479-201ENSMUST00000121706 932 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
H1fooQ8VIK3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
H1fooQ8VIK3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms