Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm6621-201ENSMUST00000193251 772 ntBASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm19931-201ENSMUST00000198920 368 ntBASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Ndc1Q8VCB1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Ndc1Q8VCB1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Snord83b-201ENSMUST00000104546 94 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm14704-201ENSMUST00000120300 874 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm24548-201ENSMUST00000158650 108 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm22121-201ENSMUST00000175148 54 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ndc1Q8VCB1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ndc1Q8VCB1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms