Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Gm7046-201ENSMUST00000221351 977 ntBASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cuedc1Q8R3V6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm15370-201ENSMUST00000117158 253 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm6023-201ENSMUST00000118217 606 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm12997-201ENSMUST00000120207 640 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm28195-201ENSMUST00000186992 372 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm6621-201ENSMUST00000193251 772 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm6082-201ENSMUST00000215204 454 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Gm10146-201ENSMUST00000072739 309 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cuedc1Q8R3V6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cuedc1Q8R3V6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm4986-201ENSMUST00000119731 549 ntBASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm7029-201ENSMUST00000173226 450 ntBASIC11.7□□□□□ -0.54
Cuedc1Q8R3V6 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms