Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.25■□□□□ 0.19
Chmp7Q8R1T1 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm9083-201ENSMUST00000120423 819 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm24749-201ENSMUST00000157838 343 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm42997-202ENSMUST00000200321 985 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Gm17812-201ENSMUST00000204935 318 ntBASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.24■□□□□ 0.19
Chmp7Q8R1T1 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Rmrp-201ENSMUST00000157463 271 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm8494-201ENSMUST00000178171 1233 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm43378-201ENSMUST00000199336 582 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm19187-201ENSMUST00000206781 892 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 AL732506.1-201ENSMUST00000226420 281 ntBASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp7Q8R1T1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Gm18730-201ENSMUST00000218038 343 ntBASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chmp7Q8R1T1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms