Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Daam2-202ENSMUST00000224595 1926 ntBASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
H2afjQ8R1M2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.51
H2afjQ8R1M2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
H2afjQ8R1M2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
H2afjQ8R1M2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm2423-201ENSMUST00000074863 733 ntBASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afjQ8R1M2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afjQ8R1M2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms