Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.02□□□□□ -0.49
Clrn1Q8K445 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.02□□□□□ -0.49
Clrn1Q8K445 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.02□□□□□ -0.49
Clrn1Q8K445 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clrn1Q8K445 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Gm11425-201ENSMUST00000119608 498 ntBASIC12.01□□□□□ -0.49
Clrn1Q8K445 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.01□□□□□ -0.49
Clrn1Q8K445 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Gm9396-201ENSMUST00000076703 567 ntBASIC12.01□□□□□ -0.49
Clrn1Q8K445 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.01□□□□□ -0.49
Clrn1Q8K445 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clrn1Q8K445 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12□□□□□ -0.49
Clrn1Q8K445 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Gm12384-201ENSMUST00000119228 919 ntBASIC12□□□□□ -0.49
Clrn1Q8K445 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12□□□□□ -0.49
Clrn1Q8K445 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clrn1Q8K445 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clrn1Q8K445 Gm8617-201ENSMUST00000118796 2222 ntBASIC12□□□□□ -0.49
Clrn1Q8K445 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clrn1Q8K445 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clrn1Q8K445 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Clrn1Q8K445 Gm44775-201ENSMUST00000207266 1456 ntBASIC12□□□□□ -0.49
Clrn1Q8K445 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clrn1Q8K445 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clrn1Q8K445 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms