Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm8805-201ENSMUST00000117848 313 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm27437-201ENSMUST00000183429 107 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.33□□□□□ -0.6
ShfQ8CG80 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm8227-201ENSMUST00000223306 571 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.33□□□□□ -0.6
ShfQ8CG80 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.33□□□□□ -0.6
ShfQ8CG80 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.33□□□□□ -0.6
ShfQ8CG80 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
ShfQ8CG80 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm12384-201ENSMUST00000119228 919 ntBASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm2231-201ENSMUST00000125661 612 ntBASIC11.32□□□□□ -0.6
ShfQ8CG80 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
ShfQ8CG80 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.32□□□□□ -0.6
ShfQ8CG80 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Gm7287-201ENSMUST00000205267 602 ntBASIC11.32□□□□□ -0.6
ShfQ8CG80 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
ShfQ8CG80 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
ShfQ8CG80 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
ShfQ8CG80 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.31□□□□□ -0.6
ShfQ8CG80 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.31□□□□□ -0.6
ShfQ8CG80 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.31□□□□□ -0.6
ShfQ8CG80 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms