Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Fam228aQ8CDW1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm15321-201ENSMUST00000121290 288 ntBASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm12291-201ENSMUST00000121627 311 ntBASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm44397-201ENSMUST00000195950 113 ntBASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm6983-201ENSMUST00000214912 628 ntBASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.34□□□□□ -0.27
Fam228aQ8CDW1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Fam228aQ8CDW1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Gm5687-201ENSMUST00000118252 640 ntBASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Fam228aQ8CDW1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam228aQ8CDW1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Fam228aQ8CDW1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms