Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rsph6aQ8CDR2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Rsph6aQ8CDR2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rsph6aQ8CDR2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm14539-201ENSMUST00000117527 174 ntBASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm22993-201ENSMUST00000175423 254 ntBASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Gm13615-201ENSMUST00000120242 1612 ntBASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rsph6aQ8CDR2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm13665-201ENSMUST00000120830 528 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm27023-201ENSMUST00000182372 285 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm8679-201ENSMUST00000210651 1036 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 AC154222.2-201ENSMUST00000225848 607 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.62■□□□□ 0.25
Rsph6aQ8CDR2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms