Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm5356-201ENSMUST00000093326 615 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc87Q8CDL9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Gm6983-201ENSMUST00000214912 628 ntBASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc87Q8CDL9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Mir686-201ENSMUST00000102174 109 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm12928-201ENSMUST00000117115 573 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm18187-201ENSMUST00000196476 984 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc87Q8CDL9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccdc87Q8CDL9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms