Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm37259-201ENSMUST00000193903 849 ntBASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Prpf31Q8CCF0 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm2546-201ENSMUST00000182630 991 ntBASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm9257-201ENSMUST00000221254 232 ntBASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Prpf31Q8CCF0 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm11222-201ENSMUST00000119005 738 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm13875-201ENSMUST00000120162 282 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Gm44405-201ENSMUST00000198952 126 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Prpf31Q8CCF0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms