Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sh3rf3Q8C120 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Gm40466-201ENSMUST00000212174 422 ntBASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sh3rf3Q8C120 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Gm1335-201ENSMUST00000121653 386 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Gm10268-201ENSMUST00000085340 555 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sh3rf3Q8C120 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sh3rf3Q8C120 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms