Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm38341-201ENSMUST00000195357 515 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm44405-201ENSMUST00000198952 126 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm3961-201ENSMUST00000204425 994 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm7783-201ENSMUST00000204795 781 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim47Q8C0E3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm11964-201ENSMUST00000120982 444 ntBASIC14.11□□□□□ -0.15
Trim47Q8C0E3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.11□□□□□ -0.15
Trim47Q8C0E3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim47Q8C0E3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm13736-201ENSMUST00000119272 253 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm13350-201ENSMUST00000120519 479 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm5950-201ENSMUST00000213337 772 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim47Q8C0E3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim47Q8C0E3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms