Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.24□□□□□ -0.61
SprnQ8BWU1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SprnQ8BWU1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.23□□□□□ -0.61
SprnQ8BWU1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Gm11478-201ENSMUST00000117851 599 ntBASIC11.23□□□□□ -0.61
SprnQ8BWU1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.23□□□□□ -0.61
SprnQ8BWU1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.23□□□□□ -0.61
SprnQ8BWU1 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SprnQ8BWU1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SprnQ8BWU1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
SprnQ8BWU1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms