Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdk5rap1Q8BTW8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm2546-201ENSMUST00000182630 991 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm30285-201ENSMUST00000214614 422 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdk5rap1Q8BTW8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm22323-201ENSMUST00000103832 109 ntBASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm14726-201ENSMUST00000120623 896 ntBASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap1Q8BTW8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms