Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cpsf7Q8BTV2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm12291-201ENSMUST00000121627 311 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm42612-201ENSMUST00000197986 623 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm43170-201ENSMUST00000199827 612 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cpsf7Q8BTV2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Gm9797-201ENSMUST00000052902 613 ntBASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cpsf7Q8BTV2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm22189-201ENSMUST00000103822 86 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm38223-201ENSMUST00000194484 695 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpsf7Q8BTV2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms