Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco3Q8BQM7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22065-201ENSMUST00000103753 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22066-201ENSMUST00000103761 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24932-201ENSMUST00000103763 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24115-201ENSMUST00000103799 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22190-201ENSMUST00000103827 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22191-201ENSMUST00000103831 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24721-201ENSMUST00000103849 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm28018-201ENSMUST00000103869 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm26399-201ENSMUST00000103937 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25349-201ENSMUST00000177728 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm23616-201ENSMUST00000177797 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25871-201ENSMUST00000177816 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24752-201ENSMUST00000178240 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24496-201ENSMUST00000178287 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25649-201ENSMUST00000178476 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25548-201ENSMUST00000178681 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm23147-201ENSMUST00000178841 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm26095-201ENSMUST00000179270 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22171-201ENSMUST00000179283 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm23936-201ENSMUST00000179354 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm22619-201ENSMUST00000179516 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25255-201ENSMUST00000179579 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24755-201ENSMUST00000179691 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm26506-201ENSMUST00000179692 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm25086-201ENSMUST00000179931 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm23243-201ENSMUST00000180047 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24659-201ENSMUST00000180212 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm24169-201ENSMUST00000180244 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm23689-201ENSMUST00000180354 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm27359-201ENSMUST00000184153 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm27785-201ENSMUST00000184268 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm27466-201ENSMUST00000184396 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm27703-201ENSMUST00000184836 110 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm28630-201ENSMUST00000187806 498 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco3Q8BQM7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms