Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm14928-201ENSMUST00000120198 477 ntBASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Gm6458-201ENSMUST00000211573 635 ntBASIC12.31□□□□□ -0.44
Rnf38Q8BI21 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Daam2-202ENSMUST00000224595 1926 ntBASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf38Q8BI21 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm8515-201ENSMUST00000194852 576 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf38Q8BI21 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm12091-201ENSMUST00000146791 830 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm23984-201ENSMUST00000157139 203 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm2495-201ENSMUST00000191160 466 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm44124-201ENSMUST00000204159 472 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gm6180-201ENSMUST00000065243 498 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf38Q8BI21 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf38Q8BI21 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 225.7 ms