Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.54□□□□□ -0.24
Trim6Q8BGE7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim6Q8BGE7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim6Q8BGE7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim6Q8BGE7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Mir6956-201ENSMUST00000183598 62 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm25007-201ENSMUST00000083808 133 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim6Q8BGE7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim6Q8BGE7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Gm12151-201ENSMUST00000121374 290 ntBASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Gm14719-201ENSMUST00000121891 340 ntBASIC13.52□□□□□ -0.25
Trim6Q8BGE7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Gm44124-201ENSMUST00000204159 472 ntBASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim6Q8BGE7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.51□□□□□ -0.25
Trim6Q8BGE7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim6Q8BGE7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms