Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Sox21Q811W0 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Sox21Q811W0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Sox21Q811W0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Sox21Q811W0 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm11978-201ENSMUST00000122315 466 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm8738-201ENSMUST00000172606 329 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm4857-201ENSMUST00000192718 785 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Sox21Q811W0 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.45□□□□□ -0.74
Sox21Q811W0 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm12502-201ENSMUST00000120197 444 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm17376-201ENSMUST00000166016 84 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm32025-201ENSMUST00000217960 307 ntBASIC10.44□□□□□ -0.74
Sox21Q811W0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Sox21Q811W0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Sox21Q811W0 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms