Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim50Q810I2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm8099-201ENSMUST00000200510 742 ntBASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm40466-201ENSMUST00000212174 422 ntBASIC12.42□□□□□ -0.42
Trim50Q810I2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.42□□□□□ -0.42
Trim50Q810I2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim50Q810I2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.42□□□□□ -0.42
Trim50Q810I2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim50Q810I2 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.42□□□□□ -0.42
Trim50Q810I2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim50Q810I2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim50Q810I2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim50Q810I2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trim50Q810I2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.41□□□□□ -0.42
Trim50Q810I2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim50Q810I2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.4□□□□□ -0.42
Trim50Q810I2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.4□□□□□ -0.42
Trim50Q810I2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trim50Q810I2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim50Q810I2 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms