Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rpp38Q80UU2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rpp38Q80UU2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Gm8018-201ENSMUST00000173536 789 ntBASIC12.7□□□□□ -0.38
Rpp38Q80UU2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpp38Q80UU2 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm5187-201ENSMUST00000117317 991 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Rmrp-201ENSMUST00000157463 271 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm18062-201ENSMUST00000208020 547 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm18055-201ENSMUST00000208254 547 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpp38Q80UU2 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms