Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm14350-201ENSMUST00000116642 640 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.79□□□□□ -0.36
Usp8Q80U87 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp8Q80U87 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp8Q80U87 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.78□□□□□ -0.36
Usp8Q80U87 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.78□□□□□ -0.36
Usp8Q80U87 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.78□□□□□ -0.36
Usp8Q80U87 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp8Q80U87 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp8Q80U87 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Usp8Q80U87 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp8Q80U87 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Usp8Q80U87 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp8Q80U87 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Gm27701-201ENSMUST00000184498 110 ntBASIC12.77□□□□□ -0.37
Usp8Q80U87 Gm18018-201ENSMUST00000198273 408 ntBASIC12.77□□□□□ -0.37
Usp8Q80U87 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp8Q80U87 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms