Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm2594-201ENSMUST00000214774 742 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdh19Q80TF3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm25668-201ENSMUST00000157700 129 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm38092-201ENSMUST00000195600 653 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Pcdh19Q80TF3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh19Q80TF3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms