Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh8Q7TSK3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh8Q7TSK3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh8Q7TSK3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pcdh8Q7TSK3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Pcdh8Q7TSK3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh8Q7TSK3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm24255-201ENSMUST00000104481 128 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm22121-201ENSMUST00000175148 54 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh8Q7TSK3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gm8099-201ENSMUST00000200510 742 ntBASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdh8Q7TSK3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm11222-201ENSMUST00000119005 738 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm15808-201ENSMUST00000119046 604 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm18056-201ENSMUST00000207670 568 ntBASIC12.56□□□□□ -0.4
Pcdh8Q7TSK3 Gm18061-201ENSMUST00000208350 562 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms