Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Gm27023-201ENSMUST00000182372 285 ntBASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Gm6082-201ENSMUST00000215204 454 ntBASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ubfd1Q78JW9 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm25214-201ENSMUST00000104573 129 ntBASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ubfd1Q78JW9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ubfd1Q78JW9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ubfd1Q78JW9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.4□□□□□ -0.43
Ubfd1Q78JW9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ubfd1Q78JW9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Gm25043-201ENSMUST00000158604 212 ntBASIC12.39□□□□□ -0.43
Ubfd1Q78JW9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms