Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rad54bQ6PFE3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Gm12384-201ENSMUST00000119228 919 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Gm8227-201ENSMUST00000223306 571 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Gm2423-201ENSMUST00000074863 733 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rad54bQ6PFE3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Mir6977-201ENSMUST00000184960 64 ntBASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.79□□□□□ -0.36
Rad54bQ6PFE3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms