Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm17391-201ENSMUST00000171036 126 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm44882-201ENSMUST00000205702 802 ntBASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Nup98Q6PFD9 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm7851-201ENSMUST00000117574 323 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Mir1943-201ENSMUST00000158276 73 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Mir7686-201ENSMUST00000200604 57 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.72□□□□□ -0.05
Nup98Q6PFD9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gm12857-201ENSMUST00000117678 592 ntBASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gm12501-201ENSMUST00000119163 529 ntBASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gm8343-201ENSMUST00000182705 994 ntBASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Nup98Q6PFD9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.71□□□□□ -0.05
Nup98Q6PFD9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Gm28071-201ENSMUST00000190355 478 ntBASIC14.71□□□□□ -0.06
Nup98Q6PFD9 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms